Table 5. Gossip analysis of GO terms enrichment in late flower development dataset (genes that are differentially expressed at least once during floral maturation and senescence).
GO Term | Name | FDR | FWER | single test p-Value | # in test group | # in reference group | # non annoted test | # non annoted reference group | Over/Under | |
Late floral development upregulated genes | GO:0005634 | nucleus | 0.0 | 0.0 | 0.012 | 0 | 107 | 56 | 1290 | under |
GO:0009059 | macromolecule biosynthetic process | 0.0 | 0.0 | 0.028 | 0 | 88 | 56 | 1309 | under | |
GO:0043232 | intracellular non-membrane-bounded organelle | 0.0 | 0.0 | 0.030 | 0 | 86 | 56 | 1311 | under | |
GO:0030529 | ribonucleoprotein complex | 0.0 | 0.0 | 0.030 | 0 | 84 | 56 | 1313 | under | |
GO:0015996 | chlorophyll catabolic process | 0.008 | 0.008 | 5.43E-5 | 3 | 0 | 53 | 1397 | over | |
GO:0046700 | heterocycle catabolic process | 0.028 | 0.062 | 5.13E-4 | 3 | 2 | 53 | 1395 | over | |
GO:0044270 | cellular nitrogen compound catabolic process | 0.028 | 0.062 | 5.13E-4 | 3 | 2 | 53 | 1395 | over | |
Late floral development downregulated genes | GO:0019538 | protein metabolic process | 0.0 | 0.0 | 0.009 | 5 | 225 | 73 | 1150 | under |
GO:0005886 | plasma membrane | 0.012 | 0.006 | 0.013 | 4 | 192 | 74 | 1183 | under | |
GO:0008415 | acyltransferase activity | 0.016 | 0.025 | 1.62E-4 | 7 | 17 | 71 | 1358 | over | |
GO:0042967 | acyl-carrier-protein biosynthetic process | 0.016 | 0.028 | 2.15E-4 | 7 | 18 | 71 | 1357 | over | |
GO:0000036 | acyl carrier activity | 0.027 | 0.079 | 5.73E-4 | 3 | 1 | 75 | 1374 | over | |
GO:0044262 | cellular carbohydrate metabolic process | 0.027 | 0.084 | 6.73E-4 | 15 | 99 | 63 | 1276 | over | |
GO:0005976 | polysaccharide metabolic process | 0.027 | 0.086 | 7.08E-4 | 10 | 48 | 68 | 1327 | over |
The reference group that was used corresponds to the full annotated sequences (sequences with GO terms) of the microarray.