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. 2011 Dec 14;6(12):e28455. doi: 10.1371/journal.pone.0028455

Table 5. Gossip analysis of GO terms enrichment in late flower development dataset (genes that are differentially expressed at least once during floral maturation and senescence).

GO Term Name FDR FWER single test p-Value # in test group # in reference group # non annoted test # non annoted reference group Over/Under
Late floral development upregulated genes GO:0005634 nucleus 0.0 0.0 0.012 0 107 56 1290 under
GO:0009059 macromolecule biosynthetic process 0.0 0.0 0.028 0 88 56 1309 under
GO:0043232 intracellular non-membrane-bounded organelle 0.0 0.0 0.030 0 86 56 1311 under
GO:0030529 ribonucleoprotein complex 0.0 0.0 0.030 0 84 56 1313 under
GO:0015996 chlorophyll catabolic process 0.008 0.008 5.43E-5 3 0 53 1397 over
GO:0046700 heterocycle catabolic process 0.028 0.062 5.13E-4 3 2 53 1395 over
GO:0044270 cellular nitrogen compound catabolic process 0.028 0.062 5.13E-4 3 2 53 1395 over
Late floral development downregulated genes GO:0019538 protein metabolic process 0.0 0.0 0.009 5 225 73 1150 under
GO:0005886 plasma membrane 0.012 0.006 0.013 4 192 74 1183 under
GO:0008415 acyltransferase activity 0.016 0.025 1.62E-4 7 17 71 1358 over
GO:0042967 acyl-carrier-protein biosynthetic process 0.016 0.028 2.15E-4 7 18 71 1357 over
GO:0000036 acyl carrier activity 0.027 0.079 5.73E-4 3 1 75 1374 over
GO:0044262 cellular carbohydrate metabolic process 0.027 0.084 6.73E-4 15 99 63 1276 over
GO:0005976 polysaccharide metabolic process 0.027 0.086 7.08E-4 10 48 68 1327 over

The reference group that was used corresponds to the full annotated sequences (sequences with GO terms) of the microarray.