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. Author manuscript; available in PMC: 2012 Aug 30.
Published in final edited form as: Proteins. 2011 Aug 30;79(Suppl 10):74–90. doi: 10.1002/prot.23131

Table 1.

Summary of CASP9 refinement targets.

Target PDB Residues Method GDT-HA RMSD (Å) GDC-SC SG MP Missing Focus
TR517 3pnx 159 X-ray 54.7 4.6 30.2 55.2 1.4 - 65–88
TR530 3npp 115 X-ray 70.9 2.0 39.8 83.8 0.9 1–35 45–58; 75–79
TR557 2kyy 145 NMR 48.6 4.1 28.8 42.4 1.5 126–145 15; 61
TR567 3n70 145 X-ray 59.0 3.4 38.1 80.3 1.4 1–3 63; 103
TR568 3n6y 158 X-ray 35.8 6.1 16.8 18.6 1.5 1–61 102; 116
TR569 2kyw 79 NMR 52.9 3.0 35.2 45.6 0.7 - 50–60
TR574 3nrf 126 X-ray 39.7 3.6 21.6 44.1 3.6 1–24 -
TR576 3na2 172 X-ray 46.9 6.9 17.4 50.0 3.7 1–24; 140–172 57–65; 120+
TR592 3nhv 144 X-ray 74.0 1.3 43.4 92.4 3.5 1–16; 122+ 33; 63
TR594 3ni8 140 X-ray 67.5 1.8 39.2 87.1 2.9 - 110
TR606 3noh 169 X-ray 53.2 4.8 29.6 52.0 3.2 1–45; 169 46–55; 149–168
TR614a nab 135 X-ray 52.6 5.3 27.9 43.8 4.0 1; 123–135 -
TR622 3nkl 138 X-ray 49.4 7.5 25.6 53.3 3.7 123–138 97+
TR624 3nrl 81 X-ray 36.6 5.2 14.6 46.4 1.9 1–4; 74–81 14; 24; 54
a

For target TR614, two starting models were provided and we show the average score.

b

As of publication, the structure of target TR614 was not available from the PDB.