Each plot shows a comparison of a full SOLM model, an ODE model ignoring
crowding effects, and an ODE model using the URM to adjust for crowding in
the simulation. Each SOLM simulation uses default parameter values (B
= 0.7, M = 1ns, D =
6.95×10−11m2s−1,
and α = 2, β = 1, dth = 0.5nm). Each
SOLM curve shows an average over 30 repetitions, with error bars omitted for
clarity. ODEs are simulated using estimated rate parameters from the
quasi-ideal equilibrium constant in table 1 and
default parameter value of M. URM simulations are simulated using the
default value of M to derive reverse rates and URM estimates of
keq to determine forward rates for the given
M. (a) total concentration 0.2 (0.1 CR + 0.1
CI). (b) total concentration 0.3 (0.1
CR + 0.2 CI)