Table 1. Mapping statistics of SOLiD output.
Number of reads ×106 in cells of | ||||
H44/76 wt | H44/76ΔmseR | |||
Reads | replicate A (%) | replicate B (%) | replicate A (%) | replicate B (%) |
Mapped to genome | ||||
Excluding tRNA/rRNA | 20 (24%) | 12 (21%) | 18 (20%) | 12 (24%) |
tRNA/rRNA genes only | 37 (44%) | 27 (47%) | 28 (30%) | 22 (44%) |
Unmapped | 27 (32%) | 19 (33%) | 46 (50%) | 16 (32%) |
Total | 84 (100%) | 58 (100%) | 92 (100%) | 50 (100%) |
Two technical replicates were performed for both H44/76 wt and H44/76ΔmseR, resulting in a total of 280×106 reads.