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Compositions of predicted and actual secondary structure types for the CASP9 set
| Method | %H | %E | %C |
|---|---|---|---|
| QUARK | 38.2 | 15.7 | 46.1 |
| RaptorX-MSA | 32.7 | 18.6 | 48.0 |
| HHPREDB | 29.8 | 16.9 | 53.2 |
| Chunk-TASSER | 36.3 | 14.5 | 49.2 |
| MULTICOM-R | 35.9 | 19.3 | 44.8 |
| ROSETTA | 38.7 | 19.5 | 41.8 |
| SPARKS-X | 34.4 | 20.0 | 45.6 |
|
| |||
| PSIPRED | 33.0 | 20.7 | 46.3 |
| This work | 37.3 | 20.9 | 41.7 |
| Native | 37.3 | 23.6 | 39.1 |
