Skip to main content
. Author manuscript; available in PMC: 2013 Jan 1.
Published in final edited form as: Proteins. 2011 Oct 31;80(1):111–125. doi: 10.1002/prot.23168

Table 2.

Fitting results for Neutral, Charged, and Glycine/Proline mutations, Individually and Combined.

Residue Type Model # np α β γ δ ε < | error | >jack rjack

All 1 2 0.32 0.07 0.07 0.00 0.00 0.95 0.60
Neutral 2 5 0.17 0.13 0.21 −0.19 −0.94 0.83 0.67
Charged 2 2 0.17 0.07 0.07 0.00 0.00 0.73 0.38
Glycine/Proline 2 2 0.53 0.08 0.08 0.00 0.53 0.94 0.75

np= number of LIE coefficients; α, β, γ, δ and ε are the LIE coefficients;

|error|jack= average unsigned error for jack-knife validation; rjack = pearson correlation coefficient for the jack knife validation;

The average unsigned error for the jack knife validation is in units of kcal/mol.

Models 1 and 2 were fit using the equation:
ΔΔGcalc=α(ΔΔ<VLJ>)+β(ΔΔ<Vel>)+γ(ΔΔ<Gel>)+δ(ΔΔ<Gcav>)+ε(ΔΔ<Gvdw>)