Table 3.
The results of I-TASSER structure predictions, the number of putative ligand binding sites predicted by template-based transfer and the number of active compounds in the screening library for virtual screening target proteins
TM-scorea | RMSDb | Number of Predicted sites | Number of Actives | |
---|---|---|---|---|
CDK2 | 0.86 | 1.99 | 22 | 72 |
EGFr | 0.86 | 3.49 | 14 | 100 |
FGFr1 | 0.90 | 0.91 | 18 | 100 |
PDE5 | 0.93 | 1.22 | 6 | 88 |
Thrombin | 0.91 | 4.28 | 13 | 72 |
TK | 0.93 | 1.65 | 3 | 22 |
TM-score of the full-length I-TASSER model compared to the native.
The Cα RMSD (Å) of the I-TASSER model to the native in the binding site residues.