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. 2011 Nov 25;10:145. doi: 10.1186/1476-4598-10-145

Table 2.

Summary of the impact of siRNAs to deplete eight proteins in SW480 and HT29 colorectal cancer cell lines treated with oxaliplatin (compared to EC50 of siRNA against GFP).

Gene Name siRNA Sequence of siRNA Phenotype in SW480 Phenotype in HT29
FBL a CCGGAUGGUCUAGUCUAUGCA Resistance Sensitivity
b CCUCAUUAACUUGGCCAAGAA No change Sensitivity
c UUCAUUUGUCGAGGAAAGGAA Resistance Sensitivity
d CUGCGUAAUGGAGGACACUUU Resistance Sensitivity
FLJ20758 a ACCAUUUAGAUUCAACAUUAA Resistance Sensitivity
b CAGGACAGAGAGAGUAAAUUA Resistance Sensitivity
c AACCAGUUAGCUGCUAUAUAA Resistance Sensitivity
d CCCAGGAAAUAGCCUAUUAAA No change No change
HNRPK a CAGCAAGUUUAUUAAUCAGAA Resistance Sensitivity
b CUCUAGUGUCUUAUUAGUUAA No change Sensitivity
c AUGGAAGUGACUAAUGCUGAA Resistance No change
d UUCCAUUGUAUGCAAAUUGAA No change No change
NONO a CCAAGUGGACCGCAACAUCAA Sensitivity Sensitivity
b CUGUGUUUGAUUUGUCUCAUA No change Sensitivity
c AGGCUUGACUAUUGACCUGAA Sensitivity Sensitivity
d AACAAACGUCGCCGAUACUAA Sensitivity Sensitivity
PABPC1 a AAACGUAAUUUGGAUUAUAAA No change No change
b CGGGCUCGGAACACACAUUUA Resistance Sensitivity
c GACAAAUCCAUUGAUAAUAAA No change No change
d CCGCACCGUUCCACAGUAUAA Resistance Sensitivity
RALY a CUCAGCCAAGAUCAAGUUAAA Sensitivity Sensitivity
b CGGGCAGACCCUGGACAUCAA No change Sensitivity
c AAGCAAUGUAACCAACAAGAA Sensitivity Sensitivity
d CACCAUGUCCUUGAAGCUUCA No change Sensitivity
RPS7 a CCGGCUAGUACGCGAAUUGGA Resistance Resistance
b CACGGGCAAGGAUGUUAAUUU Resistance Resistance
c CAGCCGGCUCAUAAAGGUUCA Resistance Resistance
d UUCGAGCGCCAAGAUCGUGAA Resistance Resistance
RPS8 a UGGCUAUGUGCUAGAGGGCAA Resistance Resistance
b AUCGUGCUCAUCGACAGCACA Resistance Resistance
c CUCAGAGUGUUGUACUCGUAA Resistance Resistance
d AAGAGUUGGAGUUCUAUCUUA Resistance No change

Genes in bold indicate similar effects with at least two siRNA molecules in both cells lines.