Table 1.

Number of Short-Reads Derived by RNAseq and Summary of Mapping Results

Tissue	Total No. of Short Reads	No. of Uniquely Mapped Reads	Total Nucleotide Length of the Mapped Reads (bp)	Fold Coverage of the Uniquely Mapped Reads against RAP-Annotated Regions
Callus	36,642,482	23,506,559	1,071,781,348	20.2
Leaf	33,537,231	19,334,815	886,753,671	16.7
Panicle (before flowering)	39,438,983	22,845,156	1,051,085,731	19.8
Panicle (after flowering)	46,071,816	28,541,187	1,392,167,801	26.2
Root	33,307,824	20,493,666	927,208,012	17.5
Seed	48,619,562	27,646,800	1,364,148,154	25.7
Shoot	40,442,971	24,143,731	1,135,190,328	21.4
Total	278,060,869	166,511,914	7,828,335,045	147.4