Table 5.

Differentially methylated regions in the hippocampus vs. cerebral cortex comparison

Genome Browser Coordinates	Gene Symbol	Distance to Gene	CpG Islands	Higher DNAm	%DNAm Diff.	p-value	FDR
Chr12: 45,347,564–45,351,475	Mn1	Inside	1	Hippo	20.6	0.0	0.0
Chr2: 35,033,486–35,035,978	Sgtb	Inside	1	Hippo	30.9	0.0	0.0
Chr6: 106,441,530–106,445,010	Rgs6	Inside	1	Hippo	24.4	0.0	0.0
Chr5: 168,183,812–168,186,648	Per3	Inside	2	Hippo	21.0	6.27E-06	0.01320
Chr4: 143,786,105–143,788,729	Itpr1	Inside	2.7 kb	Hippo	18.1	9.41E-06	0.01584
Chr16: 84,120,811–84,122,716	Myo16	Inside	1	Hippo	19.7	1.25E-05	0.01613
Chr4: 181,164,135–181,165,375	Sox5	Inside	3.2 kb	Hippo	25.1	1.57E-05	0.01613
Chr13: 94,585,945–94,587,708	Kif26b	Inside	1	Cortex	28.4	1.88E-05	0.01613
Chr13: 86,481,997–86,484,172	Olfml2b	Inside	1	Cortex	19.0	2.20E-05	0.01613
Chr5: 168,846,212–168,848,013	Camta1	Inside	3	Hippo	25.3	2.51E-05	0.01613
Chr16: 36,321,307–36,323,466	Hand2	0.9 kb 3′	2.1 kb	Hippo	21.3	2.51E-05	0.01613
Chr17: 75,579,727–75,582,148	Klf6	Inside	2.6 kb	Hippo	17.3	2.51E-05	0.01613
Chr14: 62,376,614–62,378,023	RGD1565192	83.0 kb 3′	1	Hippo	27.8	2.82E-05	0.01613
Chr12: 41,940,197–41,942,570	Cit	Inside	1	Hippo	15.2	3.14E-05	0.01613
Chr4: 119,735,872–119,737,908	RGD1566130	Inside	1	Hippo	20.7	3.14E-05	0.01613
Chr16: 79,658,784–79,660,476	Dlgap2	Inside	1	Hippo	22.7	3.14E-05	0.01613
Chr15: 106,120,893–106,123,423	Farp1	57.1 kb 5′	0.9 kb	Hippo	20.6	3.45E-05	0.01613
Chr4: 149,658,032–149,659,735	Atp2b2	Inside	1	Hippo	17.9	3.45E-05	0.01613
Chr2: 45,447,298–45,449,568	Arl15	3.3 kb 5′	1	Cortex	21.3	3.76E-05	0.01662
Chr3: 41,331,394–41,333,824	Tanc1	30.4 kb 5′	0.4 kb	Cortex	15.1	4.39E-05	0.01662

Numbers in the CpG Islands column indicate either the number of CpG islands that overlap the DMR, or if zero, the distance to the closest CpG island. Gene names marked in bold indicate genes annotated in the UCSC Genome Browser only for the human and mouse, but presumed to exist in the rat.