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. 2011 Nov 1;6(11):1391–1399. doi: 10.4161/epi.6.11.18125

Table 1.

List of primers used in this study

For RT-PCR
NAA10-F: ATG AAC ATC CGC AAT GCG AGG
NAA10-R: CTA GGA GGC TGA GTC GGA GG
NAA11-F: CAG CAC ACT TTC TGA TTC TGA AG
NAA11-R: GTA ATG GCA GGT CTC AAA GTT C
GAPD-5: ACC ACA GTC CAT GCC ATC AC
GAPD-3: TCC ACC ACC CTG TTG CTG TA
For cloning of NAA11 promoter*
NAA11-pro-F: TAA GGC ACG CGT TGT TAT ATG GGT TTC TCC AGT TTG TG
NAA11-pro-R: TAA GGC AAG CTT CTG AGC GTT GCG GAT GTT C
For DNA sequencing
M13-R: GGA AAC AGC TAT GAC CAT
M13-20: GTA AAA CGA CGG CCA GTG
For MS-PCR
M-NAA10-1F: GTT TCG CGT ATT GGT TAA GC
M-NAA10-1R: GTA AAA ACG CAA TCA ACT ACC G
U-NAA10-1F: GTT TGT TTT GTG TAT TGG TTA AGT G
U-NAA10-1R: CAT AAA AAC ACA ATC AAC TAC CAC C
M-NAA11-F: TGC GTA CGT ATA CGT ATA ATG AAG C
M-NAA11-R: ATA AAA AAC GAA TAA CGA AAA AAC G
U-NAA11-F: GTG TAT GTA TAT GTA TAA TGA AGT GA
U-NAA11-R: AAA AAA CAA ATA ACA AAA AAA CAA A
For bisulfite sequencing
BSS-NAA11-F: ATT TAA ATT AAA AAG TTA AAA TTG AAA TAA
BSS-NAA11-R: AAA AAA CAC TAT TTA CCT CAA AAA TC
BSS-NAA11-NR: AAT CCA AAA AAC TAA CAC CAC C

All primers are listed in 5′ to 3′ orientation.

*

Underlined sequence represents a random hexameric sequence included to protect the downstream MluI (ACGCGT) and HindIII (AAGCTT) restriction sites.