Table 1.
List of primers used in this study
For RT-PCR |
NAA10-F: ATG AAC ATC CGC AAT GCG AGG |
NAA10-R: CTA GGA GGC TGA GTC GGA GG |
NAA11-F: CAG CAC ACT TTC TGA TTC TGA AG |
NAA11-R: GTA ATG GCA GGT CTC AAA GTT C |
GAPD-5: ACC ACA GTC CAT GCC ATC AC |
GAPD-3: TCC ACC ACC CTG TTG CTG TA |
For cloning of NAA11 promoter* |
NAA11-pro-F: TAA GGC ACG CGT TGT TAT ATG GGT TTC TCC AGT TTG TG |
NAA11-pro-R: TAA GGC AAG CTT CTG AGC GTT GCG GAT GTT C |
For DNA sequencing |
M13-R: GGA AAC AGC TAT GAC CAT |
M13-20: GTA AAA CGA CGG CCA GTG |
For MS-PCR |
M-NAA10-1F: GTT TCG CGT ATT GGT TAA GC |
M-NAA10-1R: GTA AAA ACG CAA TCA ACT ACC G |
U-NAA10-1F: GTT TGT TTT GTG TAT TGG TTA AGT G |
U-NAA10-1R: CAT AAA AAC ACA ATC AAC TAC CAC C |
M-NAA11-F: TGC GTA CGT ATA CGT ATA ATG AAG C |
M-NAA11-R: ATA AAA AAC GAA TAA CGA AAA AAC G |
U-NAA11-F: GTG TAT GTA TAT GTA TAA TGA AGT GA |
U-NAA11-R: AAA AAA CAA ATA ACA AAA AAA CAA A |
For bisulfite sequencing |
BSS-NAA11-F: ATT TAA ATT AAA AAG TTA AAA TTG AAA TAA |
BSS-NAA11-R: AAA AAA CAC TAT TTA CCT CAA AAA TC |
BSS-NAA11-NR: AAT CCA AAA AAC TAA CAC CAC C |
All primers are listed in 5′ to 3′ orientation.
Underlined sequence represents a random hexameric sequence included to protect the downstream MluI (ACGCGT) and HindIII (AAGCTT) restriction sites.