Table 1. Description of the 20 microsatellite loci used in this study for Leishmania donovani complex.
Locus | Locus abbreviation | GenBank Accession no. | Allele size (bp) | Chromosome | Ta (°C) | Na | Hs | F IS |
DPB1 | D1 | AF182167 | 143–147 | 8 | 59 | 4 | 0.544 | 0.970 |
DPB2 | D2 | AF182167 | 235–245 | 8 | 59 | 6 | 0.526 | 0.688 |
HG | HG | AF170105 | 187–203 | 12 | 55,2 | 6 | 0.725 | 0.887 |
Rossi1 | R1 | X76394 | 101–115 | 8 | 59 | 5 | 0.534 | 0.724 |
Rossi2 | R2 | X76393 | 143–163 | 14 | 57 | 5 | 0.657 | 0.077 |
LIST7021* | L21 | AF427869 | 216–228 | 36 | 54 | 3 | 0.423 | 0.884 |
LIST7024* | L24 | AF427872 | 198–222 | 30 | 59 | 7 | 0.786 | 0.020 |
LIST7025* | L25 | AF427873 | 168–212 | 10 | 56 | 8 | 0.373 | 0.122 |
LIST7026* | L26 | AF427874 | 207–221 | 13 | 56 | 2 | 0.300 | 0.672 |
LIST7027* | L27 | AF427875 | 185–191 | 26 | 59 | 4 | 0.501 | 0.967 |
LIST7028* | L28 | AF427876 | 151–153 | 36 | 58 | 2 | 0.450 | 0.016 |
The following parameters are described: name, abbreviation, Genebank accession number, allele size (bp), chromosome localization, thermocycling conditions (annealing temperature, Ta), genetic variation (alleles number), Na; average estimate within-sample gene diversity H S, and deviation from panmixia measured as F IS. The loci noted by ‘*’were developed by Jamjoom et al. [26].