Table 2.
Clinicopathological characteristics and gene expression variation in folds for analyzed patient samples
| Sample (Patient No.) | Age/Sex | TNM Classification | Metastasis | Histology | Treatment | Tobacco use | DIAPH1 (U) | C17orf75 (U) | RBM28 (U) | PCNA (U) | GLTP (U) | TNKS2 (D) | PAM (D) | TUBB2C (D) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54 | 40 M | T4N1M0 | N/A | WDSCC | Surgery | Yes | 7.17 | 2.16 | 1.8 | 3.31 | 2.36 | 2.24 | 14.04 | 1.30 |
| 39 | 55 F | T4N1M0 | Yes | PDSCC | Surgery/RT | Yes | 5.81 | 2.10 | 2.19 | 1.89 | 2.58 | 1.62 | 1.59 | 1.44 |
| 19 | 48 F | T4N2bM0 | No | WDSCC | Surgery/RT | Yes | 1.62 | 3.41 | 1.88 | 2.07 | 1.85 | 1.14 | 2.82 | 1.48 |
| 15 | 55 F | T3N1M0 | No | WDSCC | Surgery/RT | Yes | 0.84 | 1.33 | 1.34 | 3.79 | 2.27 | 1.74 | 1.85 | 1.01 |
| 20 | 50 F | T4N1M0 | Yes | MDSCC | Surgery/RT | Yes | 2.35 | 1.39 | 0.84 | 1.58 | 1.17 | 7.53 | 2.92 | 1.27 |
| 8 | 50 F | T3N1M0 | No | WDSCC | Surgery/RT | Yes | 0.35 | 2.50 | 1.80 | 0.87 | 2.24 | 1.59 | 1.14 | 2.07 |
| 11 | 60 F | T4N1Mx | Yes | MDSCC | Surgery/RT | Yes | 1.07 | 2.18 | 1.75 | 1.35 | 1.63 | 1.60 | 1.65 | 1.03 |
| 40 | 50 F | T2N1M0 | Yes | WDSCC | Surgery/RT | Yes | 1.36 | 2.79 | 2.27 | 10.91 | 1.03 | 0.99 | 2.68 | 2.23 |
| 50 | 40 M | T4N2bM0 | Yes | WDSCC | Surgery/RT | Yes | 1.03 | 4.69 | 1.71 | 1.06 | 1.30 | 2.00 | 1.96 | 3.46 |
| 52 | 70 M | ED | N/A | N/A | No RT | No | 1.57 | 1.55 | 1.44 | 2.24 | 2.17 | 3.77 | 0.54 | 2.30 |
| 32 | 35 M | T4N0Mx | No | WDSCC | Surgery/RT | Yes | 1.92 | 3.04 | 12.19 | 2.04 | 0.96 | 1.60 | 2.14 | 1.72 |
| 53 | 38 F | T2N0M0 | No | WDSCC | Surgery/RT | Yes | 1.11 | 3.71 | 8.18 | 1.61 | 2.04 | 1.54 | 0.35 | 2.20 |
| 55 | 40 F | T4N1M0 | Yes | WDSCC | Surgery/RT | Yes | 1.96 | 2.74 | 1.51 | 2.75 | 2.62 | 0.94 | 19.34 | 1.51 |
| 57 | 62 F | T1N0M0 | Yes | WDSCC | Surgery/RT | Yes | 3.77 | 3.57 | 1.89 | 2.61 | 1.97 | 1.50 | 3.39 | 0.55 |
| 59 | 70 F | T4N2bM0 | Yes | WDSCC | Surgery/RT | Yes | 1.72 | 1.69 | 0.71 | 1.25 | 2.04 | 0.44 | 2.09 | 1.48 |
| 60 | 40 F | T4aN1Mx | Yes | PDSCC | Surgery/RT | Yes | 1.49 | 1.22 | 2.99 | 1.08 | 1.42 | 0.81 | 0.64 | 1.59 |
M male; F female; TNM tumor, node, metastasis; ED epithelial dysplasia; N/A not known; WDSCC well-differentiated squamous cell carcinoma; PDSCC poorly-differentiated squamous cell carcinoma; MDSCC mildly-differentiated squamous cell carcinomas; and, RT, radiation therapy.‘Yes’ in tobacco use refers to addiction to tobacco, bidi and cigarettes for at least 15–20 years. (U) denotes genes whose mean expression is significantly upregulated and (D) denotes genes whose mean expression is significantly downregulated across 16 tumor samples