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. 2011 Dec 21;6(12):e28521. doi: 10.1371/journal.pone.0028521

Table 1. X-ray data collection and refinement statistics for PrTX-I/RA.

Unit cell (Å) a = 49.4, b = 67.0, c = 85.5
Space group P212121
Resolution (Å) 40-1.77 (1.86-1.77)a
Unique reflections 26992 (3895)a
Completeness (%) 95.1 (97.5)a
Rmerge b (%) 6.8 (41.2)a
Radiation source Synchrotron (MX2 station, LNLS)
I/σ(I) 16.5 (2.0)a
Matthews coefficient VM3/Dalton) 2.62
Molecules in asymmetric unit 2
Solvent content (%) 53.12
Rcryst c (%) 16.0
Rfree d (%) 21.7
Mean B-factor (Å2)e
Overall 37.2
Protein 22.7
RA molecule 44.2
R.m.s. deviations from ideal valuese
bond lengths (Å) 0.022
bond angles (o) 2.0
Ramachandran plotf
residues in most favorable/additionally allowed region (%) 89.9/9.1
residues in generously/not allowed regions (%) 1.0/0
Coordinate error (Å)
SIGMAA (cross-validated SIGMAA)e 0.07 (0.08)
a

Numbers in parenthesis are for the highest resolution shell.

b

Rmerge = Σhkli(|Ihkl,i−<Ihkl >|))/Σhkl,i <Ihkl>, where Ihkl,i is the intensity of an individual measurement of the reflection with Miller indices h, k and l, and <Ihkl> is the mean intensity of that reflection. Calculated for I>−3σ (I).

c

Rcryst = ∑hkl(∥Fobshkl|-|Fcalchkl∥)/|Fobshkl|, where |Fobshkl| and |Fcalchkl| are the observed and calculated structure factor amplitudes.

d

Rfree is equivalent to Rcryst but calculated with reflections (5%) omitted from the refinement process.

e

Calculated with the program REFMAC [67].

f

Calculated with the program PROCHECK [69].