Table 5.
Comparison of 1k77A to Four Different Proteins
| |
Adjusted EVD Param. |
|
|
|
|
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|---|---|---|---|---|---|---|---|---|
| Fold | κ | ξ | β | K-S p-value | Sequence ident. (%) | Structural simil. (%) | rmsd (Å) | Threading score p-value |
| 1i60A | 4.45 | −24.67 | 45.68 | 0.15 | 18.6 | 93.1 | 2.97 | 0.07 |
| 1qtwA | 4.62 | 31.7 | 33.76 | 0.14 | 12.1 | 91.9 | 3.35 | 0.26 |
| 1qpoA | 4.31 | −47.5 | 45.72 | 0.43 | 7.6 | 50.8 | 3.37 | 0.73 |
| 1m40A | 4.31 | 23.46 | 47.15 | 0.09 | 3.6 | 10.7 | 3.02 | 0.79 |
Four first colomns refer to the calculated extreme value distribution of random sequence threading scores. Proteins were selected to exhibit different levels of structure and sequence similarities with 1k77A: 1i60A and 1qtwA belong to its SCOP superfamily, 1qpoA to its fold, and 1m40A to a different, structurally unrelated, class. Threading score p-values were calculated with adjusted extreme-value distributions.