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. 2011 Nov 17;40(Database issue):D742–D753. doi: 10.1093/nar/gkr1014

Table 1.

List of species with 18 or more experimentally elucidated pathways represented in MetaCyc (meaning that there is experimental evidence for the occurrence of these pathways in the organism)

Bacteria Eukarya Archaea
Escherichia coli 276 Arabidopsis thaliana 311 Methanosarcina barkeri 20
Pseudomonas aeruginosa 66 Homo sapiens 186 Methanocaldococcus jannaschii 21
Bacillus subtilis 57 Saccharomyces cerevisiae 134 Methanosarcina thermophila 18
Pseudomonas putida 49 Rattus norvegicus 77 Sulfolobus solfataricus 18
Salmonella typhimurium 36 Glycine max 67
Pseudomonas fluorescens 30 Mus musculus 50
Mycobacterium tuberculosis 26 Solanum lycopersicum 48
Agrobacterium tumefaciens 25 Pisum sativum 47
Enterobacter aerogenes 25 Zea mays 46
Klebsiella pneumoniae 21 Solanum tuberosum 41
Mycobacterium smegmatis 18 Nicotiana tabacum 39
Delftia acidovorans 18 Oryza sativa 35
Hordeum vulgare 31
Spinacia oleraca 25
Triticum aestivum 23
Bos taurus 22
Sus scrofa 18
Petunia × hybrida 18

The species are grouped by taxonomic domain and are ordered within each domain based on the number of pathways (number following species name) to which the given species was assigned. Some pathways may be labeled with a higher-level taxon, such as genus, if all the species within that genus are thought to have the given pathway. However, such higher-level taxa are not included in this table.