Table 1.
Summary of data types available in PomBase
| Data type | Distinct descriptors | Total annotations | |
|---|---|---|---|
| Sequence Ontology | DNA features | 31 | 25 650 |
| Protein features | 22 | 919 | |
| Gene Ontology | Biological process | 1861 | 14 501 |
| Molecular function | 1405 | 9149 | |
| Cellular component | 543 | 16 101 | |
| Fission yeast phenotype ontology | 342 | 7043 | |
| Gene product descriptions | 4331 | 7048 | |
| Disease associations | 134 | 378 | |
| PSI-MOD(3) protein modification | 22 | 1861 | |
| EC numbers | 520 | 837 | |
| Name descriptions | 186 | 513 | |
| Annotation extensions | 254 | 340 | |
| Annotation status | 7 | 5142 | |
| BioGRID | Genetic interactions | N/A | 13 147 |
| Physical interactions | N/A | 5131 | |
| Curated fission–budding yeast orthologs | N/A | 5210 |