Table 1.

Summary of data in the GABI-Kat SimpleSearch database^a

Data type	Number of entries
FSTsb	∼133 000
Linesb	71 235
with segregation data	15 289
available at NASC	9644
Insertions with predicted insertion positionc	88 580
analysed with final resultd	16 081
delivered to individual users	6816
confirmed and available at NASCe	9653
Distinct genes covered	21 005
protein coding genes	19 120
ncRNA coding genes	182
pseudogenes	420
transposable element genes	1283
Gene hits available only from GABI-Katf	2114
Confirmed ‘GABI-Kat only’ hits at NASC	1201
‘GABI-Kat only’ hits to be adressedg	765
Distinct CDSi covered	13 037

^aNumbers as of 15 September 2011.

^bDatabase release version 24 (affects FSTs and lines that are in the database, the data values for the items in the database are updated every 24 h).

^cInsertions are different from lines, because a line can contain several insertions. Example: 011F01, which is confirmed for a genome hit at F26P21 (Chr4) and a TS2TE hit in At5g05180.

^dA final result can be ‘confirmed’, but also ‘failed to confirm’ or ‘part of a contamination group’ are considered.

^eFor each confirmed insertion there are confirmation sequences available which are generated from the amplicon that spans the T-DNA/genome sequence junction.

^fOnly hits that may cause a NULL allele (CDSi hits and hits in the 5′-UTR) are counted. Only lines in the accession Columbia-0 are considered, which is the accession used by the main FST-based insertion line collections.

^gAbout 150 ‘GABI-Kat only’ alleles are either in the queue already and wait for mature T3 seed, or did fail to confirm.