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. 2011 Dec 22;6(12):e29322. doi: 10.1371/journal.pone.0029322

Figure 1. Phylogenetic analysis of the NS5B sequences characterized in 32 HIV-infected MSM with acute HCV infection from 27 reference strains identified with their GenBank reference number (HEPAIG study, 2006–2007, France).

Figure 1

Eleven local NS5B genotype 4d sequences from French patients were added: FrSSD41, FrSSD85, FrSSD58, FrSSD37, FrSSD65, FrSSD50, FrSSD171, FrSSD163, FrSSD164, MRS95, P9_RCP including 7 identified in injecting drug users (FrSSD41, FrSSD171, FrSSD085, FrSSD092, FrSSD163, FrSSD164, FrDSS050). Additional sequences of genotypes 1a and 3a were also included in the analyses (four genotype 1a sequences from French patients (AJ231494, AJ231491, FrSSD54, FrSSD27), 1.AJ851228, 1a.EU155345 to 1a.EU155349, 1a.EU482853, 3a.GQ332555 to 3a.GQ332557, 3a.X76918). Numbers at the node indicate bootstrap values.