Table 3.
Overrepresented functional gene categories within the set of genes with a present call in a single hypha
| Number of probe sets | Hypha numbera | |||||
|---|---|---|---|---|---|---|
| Functional gene category | 1 | 2 | 3 | 4 | 5 | |
| 03.01.03 DNA synthesis and replication | 96 | 1 | 0 | 0 | 0 | 0 |
| 03.01 DNA processing | 240 | 1 | 0 | 0 | 0 | 0 |
| 05.01 Ribosome biogenesis | 138 | 1 | 1 | 1 | 0 | 1 |
| 06.13.04 Lysosomal and vacuolar degradation | 32 | 0 | 0 | 1 | 0 | 0 |
| 06.13 Proteolytic degradation | 198 | 0 | 1 | 1 | 0 | 0 |
| 08.16.99 Other export and secretion systems | 15 | 0 | 0 | 1 | 1 | 0 |
| 29.01 LTR retro-elements (retro-viral) | 28 | 0 | 0 | 1 | 0 | 0 |
| 40.05 Centrosome | 9 | 0 | 0 | 0 | 1 | 0 |
| 67.04.01.02 Other cation transporters (NA, K, CA, NH4, etc.) | 33 | 0 | 0 | 0 | 1 | 0 |
| rRNA | 8 | 1 | 1 | 1 | 1 | 1 |
| tRNA | 144 | 1 | 1 | 1 | 1 | 1 |
a1, overrepresentation of a category (P < 0.01); 0, absence of overrepresentation (P > 0.01). For P-values see Additional file 7.