Table 2. Average r.m.s. differences (Å) between the Cα atoms of AlrSas and other alanine racemases.
Alanine racemase | PDB code | Whole monomers† | N-terminal domain‡ | C-terminal domain§ | Active site¶ |
---|---|---|---|---|---|
AlrGst | 1sft | 1.34 (44%) | 1.25 (44%) | 0.71 (48%) | 0.48 (70%) |
AlrBax | 3ha1 | 1.54 (43%) | 1.47 (43%) | 0.75 (46%) | 0.53 (68%) |
AlrMtb | 1xfc | 1.67 (33%) | 1.62 (32%) | 1.13 (36%) | 0.72 (51%) |
DadXPao | 1rcq | 2.14 (30%) | 1.60 (29%) | 1.36 (32%) | 0.82 (47%) |
Calculated using monomer A.
Calculated using residues 2–241.
Calculated using residues 242–382.
Calculated using residues 37–43, 61–65, 82–86, 101–105, 127–140, 163–171, 198–205, 216–223 and 351–358 from monomer A and residues 263–266, 309–314 and 283–287 from monomer B.