Table 1.

List of the 13 MIDA Genes Analyzed, Including the AGI Loci, the Designated Protein Names, the FC in Expression in pif3 Mutant in the Dark Relative to the Wild Type, and Their Functional Category

MIDA	AGI No.	Protein Name	FC at D0 h pif3 versus Wild Type	Functional Category	Reported Function	Mutant Line	Mida Line
MIDA1	AT5G50600	HSD1	−1.61226	H	Li et al. (2007)	AOHSD16 (Li et al., 2007)	mida1-OX
MIDA2	AT3G05730	DEFL	2.78217	S/D	ND	SALK_031670	mida2
MIDA3	AT4G37300	MEE59	1.54716	G/D	ND	SALK_040468	mida3
MIDA4	AT1G02470	UNKNOWN	2.33482	UNK	ND	SALK_123221	mida4
MIDA5	AT3G47250	UNKNOWN	1.568	UNK	ND	SALK_099356	mida5
MIDA6	AT5G04340	ZN FINGER	−2.04231	TXN	ND	SALK_140448	mida6
MIDA7	AT1G48260	CIPK17	−1.76389	S	ND	SALK_130764	mida7
MIDA8	AT4G10020	HSD5	−1.50981	H	ND	SAIL_129B11	mida8
MIDA9	AT5G02760	PP2C	1.76423	S	ND	SAIL_764H11	mida9-1
MIDA9	AT5G02760	PP2C	1.76423	S	ND	SALK_672093	mida9-2
MIDA10	AT4G10240	BBX23	−1.50432	TXN	ND	SALK_053389C	mida10
MIDA11	AT2G46070	MPK12	1.679	S	Lee et al. (2009)	MPK12RNAi-9 (Lee et al., 2009)	mida11-1
MIDA11	AT2G46070	MPK12	1.679	S	Lee et al. (2009)	MPK12RNAi-17 (Lee et al., 2009)	mida11-2
MIDA12	AT1G05510	UNKNOWN	−2.5	UNK	ND	SALK_117754	mida12
MIDA13	AT5G45690	UNKNOWN	−1.705	UNK	ND	SALK_145109	mida13

The corresponding mutant lines isolated from SALK or SAIL, and the previously identified mutants are indicated together with their mida nomenclature. ND, not determined.

^aFunctional categories: G/D, growth/development; H, hormone; S, signaling; S/D, stress/defense; TXN, transcription; UNK, unknown).