Figure 4.

Histone Modifications Associated with Rice Cen8.

The sequence coordinates are shown at the top, with blue triangles representing genes, yellow rectangles representing CentO satellite repeats, and red triangles representing TE insertions. Expressed genes are marked with an “E” (RNA-Seq expression value > 0 FPKM). Enriched regions associated with H3K4me3, H3K36me3, H3K4K9ac, and H3K4me2 are marked by blue boxes; the bars underneath represent the normalized log2 value of the intensity of ChIP-chip hybridization relative to the reference. Three enriched regions within the CENH3 subdomains are marked by an asterisk. The light-yellow boxes across all tracks indicate the CENH3 binding subdomains.