Skip to main content
. 2011 Dec 27;6(12):e29451. doi: 10.1371/journal.pone.0029451

Table 2. Pathway analysis for all genes and the gene subgroups.

Set SUMSTAT SUMSQ
All genes 0.0020 0.0032
Anergy 0.1378 0.1548
Costim. 0.1022 0.1556
Treg 0.0874 0.0812
Secreted 0.0004 0.0004
tDC 0.0060 0.0082

Empirical p-values established by 5000 in-cluster (GenoMEL regional group) label permutations are shown for the pathway statistics SUMSTAT and SUMSQ. Nominally significant results are shown in italics.