Table 3.
Codon | 909, 910 | 924 | 947 | 956 | 962 | 964§ | 967 | 973 | 980§ | 980, 981§ | 985§ | 987 | 995 | 996 | 999 | 999 | 1007 | 1017 | 1026 | ||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N† | S | S | S | S | N | S | S | S | N | S | S | S | S | S | S | S | N | S | S | N | S |
AP (n = 31) | 5 | 7 | 2 | – | 1 | 2 | – | – | 1 | – | – | – | 31 | 31 | 1 | 31 | – | – | 30 | 1 | 10 |
AK (n = 20) | 2 | 4 | 2 | – | – | – | – | 20 | – | 1 | 20 | – | – | – | – | – | – | 9 | – | 1 | 8 |
AF1 (n = 14) | 7 | 3 | – | 1 | – | – | – | – | 1 | 1 | – | – | – | – | – | – | 1 | – | 11 | – | 6 |
AH (n = 13) | 4 | 4 | 2 | 1 | 1 | 2 | – | – | – | – | – | – | – | – | – | – | – | – | – | 1 | 5 |
AF4 (n = 12) | 1 | 3 | 2 | – | – | – | 2 | – | – | – | – | 12 | – | 12 | – | 12 | 2 | 1 | – | – | 2 |
AL (n = 1) | – | – | – | – | – | – | – | – | – | 1 | – | – | – | – | 1 | 1 | – | – | – | – | – |
Specific SNPs in codons: 909,910: G>CG,GG>A,G>C G>A, 924G>A, 947 T>C, 956C>T, 962C>T, 964A>G, 967A>G, 973T>C, 980T>C, 980,981 T>G A>G, 985A>G, 987T>C, 995T>C, 996C>T, 999C>T, 999T>C, 1007A>C, 1017T>C, 1026C>A.
S = synonymous mutation; N = nonsynonymous mutation: all synonymous mutations occur at the third position of identified codon, nonsynonymous mutations occur at the second position of the codon.
Species-specific fixed mutations.