TABLE 2.
Motif | Derivatives of GWWAWWWTWWC |
||||||
---|---|---|---|---|---|---|---|
All peaksa | Bestb | Goodc | Moderated | Poore | Worstf | Controlg | |
% | % | % | % | % | % | % | |
AAAAT | 50 | 62 | 49 | 41 | 49 | 46 | 18 |
AAATT | 34 | 48 | 34 | 23 | 34 | 23 | 11 |
AAATTT | 7 | 10 | 6 | 3 | 7 | 7 | 2 |
AATTTC | 12 | 22 | 12 | 5 | 11 | 7 | 3 |
ATTTC | 35 | 52 | 39 | 32 | 32 | 23 | 12 |
TTATT | 47 | 69 | 48 | 38 | 45 | 30 | 12 |
a 4,407 peaks.
b “Best” quality peaks are the 366 peaks that increased in frequency in each round of SELEX.
c “Good” quality peaks are the 932 peaks that increased in frequency in the final round of SELEX and had a fourth round frequency greater than 2,800.
d “Moderate” quality peaks are the 269 peaks that increased in frequency in the final round of SELEX and had a fourth round frequency less than 2,800.
e “Poor” quality peaks are the 2,827 peaks that increased in frequency only in the first round of SELEX.
f “Worst” quality peaks are the 13 peaks that decreased in frequency in the first round of SELEX.
g Control peaks are six pooled groups of 366 randomly selected positions in the chromosome of strain CFT073.