Table 2.
Assembly statistics from TGICL (I), and figures obtained after Pyrocleaner analysis (II), for the set of sequences reported here (III)
TGICL (I) | Pyrocleaner (II) | E. spp (III) | |
---|---|---|---|
# Contigs | 80,854 | 69,584 | 49,748 |
# reads in contigs | 1,843,806 | 1,386,859 | 851,751 |
Average length of all contigs (bp) | 552 | 608 | 734 |
# Large Contigs >500 bp | 34,076 | 33,962 | 32,694 |
Average length of large contigs | 900 | 901 | 912 |
# Singletons | 150,861 | 132,695 | 80,245 |
# UE | 231,715 | 202,279 | 129,993 |