Table 3. Tools for glycan and glycoprotein analysis.
Tools | Portable Version | Description | URL |
GlyProt | No | Modeling 3D structure of glycoproteins with attached N-glycans | http://www.glycosciences.de/modeling/glyprot/php/main.php |
SWEET-II | No | Building 3D carbohydrate models | http://www.glycosciences.de/modeling/sweet2/ |
Glydict | No | Prediction of N-glycan 3D structures | http://www.glycosciences.de/modeling/glydict/ |
Shape | Yes | Prediction of carbohydrate conformational space | http://sourceforge.net/projects/shapega/ |
GlySeq | No | Statistical analysis of residues neighboring N-glycan sequons in protein sequence | http://www.glycosciences.de/tools/glyseq/ |
GlyVicinity | No | Statistical analysis of residues surrounding carbohydrate chains in protein 3D structure | http://www.glycosciences.de/tools/glyvicinity/ |
3D, three-dimensional.