Table 2.
Parameter | Signal or calculation | Hs Myosin-7a | Mm Myosin-7a [47] | Dm Myosin-7a [48] | Dm Myosin-7a [42] | Dm Myosin-7b [50] | Mm Myosin-7b [46] |
---|---|---|---|---|---|---|---|
K 1 k +2 (μM−1s_1) | mantATP | 1.15 ± 0.01 | 2.5 ± 0.04 (dmATP) | n.d. | 3.4 ± 0.2 | 3.4 ± 0.1 (dmATP) | 1.8 ± 0.1 |
Tryptophan | 0.85 ± 0.02 | 2.2 | n.d. | 2.6 ± 0.2 | 4.7 | 4.1 ± 0.9 | |
K 1 k +2 (μM−1s−1) | Light scattering | 0.44 ± 0.01 | n.d. | 1.6 (pyrene signal) | 0.35 ± 0.04 | n.d. | 1.4 ± 0.1 |
mantATP | 0.68 ± 0.01 | 0.53 ± 0.04 (dmATP) | 1.0 ± 0.1 (dmATP) | 0.47 ± 0.02 | 2.2, 0.46 | ||
1/K 1 (μM) | Light scattering | 681.19 ± 5.63 | 295 ± 42 | 93 | n.d. | n.d. | 646 ± 100 |
k +2 (s−1) | Light scattering | 186 ± 5.70 | 350 ± 19 | 148 ± 27 | >200 | >400, >50 (pyrene-actin) | 729 ± 46 |
k 3 + k -3 (s−1) | Tryptophan | 23.1 ± 0.74 | 11.5 ± 0.83 | 10.6 ± 0.4 | 12.6 ± 0.9 | 160 ± 30 | 318 ± 23 |
k +D (μM−1s−1) | mantADP | 0.98 ± 0.05 | 1.2 ± 0.06 (dmADP) | n.d. | 3.7 ± 0.1 | 2.3 ± 0.1 (dmADP) | 3.1 ± 0.1 |
k −D (s−1) | mantADP | 0.27 ± 0.01a | n.d. | 1.8 ± 0.3 | 9.0 ± 0.2 (dmADP) | 4.5 ± 1.6 | |
mantADP | 0.20 ± 0.01b | 2.1 ± 0.07 (dmADP) | n.d. | 2.3 ± 0.1 | 10.1 ± 0.7 (dmADP) | ||
Tryptophan | 0.30 ± 0.002 | n.d. | n.d. | n.d. | n.d. | ||
K D (μM) | Tryptophan | 0.52 ± 0.09 | 3.5 (dmADP)e | n.d. | n.d. | n.d. | 0.2 ± 0.05 |
k −D/k +D | 0.27 ± 0.03 | 1.75 (dmADP) | n.d. | 0.62 ± 0.03 | 3.8 | 1.3 ± 0.5 | |
k +AD (μM−1s−1) | mantADP | 1.78 ± 0.04 | 1.5 ± 0.09 (dmADP) | 3.9 ± 0.1 (dmADP) | 4.7 ± 0.2 | 2.7 ± 0.4 (dmADP) | 3.4 ± 0.2 |
k −AD (s−1) | mantADP | 0.59 ± 0.03a | n.d. | n.d. | 2.3 ± 0.5 | 16 ± 1 (dmADP) | 7.0 ± 2.2 |
Light scattering | 0.48 ± 0.01b | 1.28 ± 0.09 (ADP) | 7.7 ± 0.8 (pyrene data) | 1.86 ± 0.03 | 9.8 ± 3.5 (pyrene-actin) | n.d. | |
mantADP | 0.32 ± 0.01b | 1.7 ± 0.2 (dmADP) | 7.8 ± 2.3 (dmADP) | 2.1 ± 0.5 | 9.6 ± 1.3 (dmADP) | 6.9 ± 0.1 | |
K i (Mg2+free) (mM) | mantADP | 0.29 ± 0.03b | n.d. | n.d. | n.d. | n.d. | n.d. |
K AD (μM) | k −AD/k +AD | 0.30 ± 0.22 (mantADP) | 1 (dmADP) | n.d. | 0.48 ± 0.127 | 3.6-5.9 (dmADP) | 2 |
Coupling* | K AD/K D | ~1.2 | ~0.3–0.6 | n.d. | ~0.8 | ~0.7–1.6 | ~10 |
Coupling** | k −AD/k −D | ~1.1–1.8 | ~0.6–0.8 | n.d. | ~1 | ~1.6 | ~1.5 |
k +A (μM−1s−1) | Pyrene-actin | 3.17 ± 0.06d | 4.7 ± 0.25 (light scattering) | n.d. | 0.88 ± 0.03 | 1.2 ± 0.1 | 12.1 ± 2.7 |
k −A (s−1) | Pyrene-actin | 0.002 ± 4·10−5 d | n.d. | n.d. | <0.0043 | 0.042 | 0.054 ± 0.0002 |
K A (nM) | k −A/k +A | 0.63 ± 0.02 | n.d. | n.d. | 4.8 | 35 | 4.5 ± 1.0 |
k +DA (μM−1 s−1) | Pyrene-actin | 1.34 ± 0.03d | 2.6 ± 0.25 (light scattering) | n.d. | 0.32 ± 0.02 | 1.0 ± 0.1 | 16.3 ± 6.0 |
k −DA (s−1) | Pyrene-actin | 0.003 ± 1·10−4 d | n.d. | n.d. | <0.03 | 0.034 | 0.043 ± 0.0001 |
K DA (nM) | k −DA/k +DA | 2 ± 0.13 | n.d. | n.d. | 94 | 34 | 2.6 ± 1.0 |
Coupling*** | K DA/K A | ~3.17 | n.d. | n.d. | ~19.5 | ~0.97 | ~0.57 |
Duty ratio | ~0.6c | 0.6 | 0.88 | ~0.9 | ~0.8 | ~0.8 |
Numbering of the kinetic rates and constants correspond to Scheme 1. Experimental conditions were as follows if not stated otherwise: 25 mM MOPS (pH 7.0), 100 mM KCl, and 5 mM MgCl2
* Thermodynamic coupling relating the affinity of ADP for actomyosin with the affinity of ADP for myosin
** ADP release rate enhancement by F-actin
*** Thermodynamic coupling relating the affinity of F-actin for myosin·ADP with the affinity of F-actin for myosin
aOrdinate of the k obs versus [mantADP] plot
bATP-chase experiment
c5 mM MgCl2, as calculated from duty ratio = ((1/k −AD) + (1/k +2))/(1/k cat)
dMOPS buffer supplemented with 10 mM DTT
eSingle turnover data