Figure 6 .

The candidate vic7 locus: the region of sequence polymorphism for C. parasitica strains EP155 and EP146 and machine-annotated ORFs located near the predicted vic7 locus. Polymorphisms between the EP155 and EP146 genome sequences on Scaffold 6 in the region mapped for the vic7 locus (Figure S7) are indicated by the absence of 454 sequence reads generated from EP146 DNA that match the corresponding EP155 reference genome sequence (arrows). The ORFs located within a 20-kbp region containing the polymorphic locus, with accompanying protein ID numbers, are shown below the 454 sequence read track. The two boxed EP155 ORFs, pID 231853 and pID 357152, showed a greater degree of sequence divergence than the surrounding ORFs, which showed near perfect or perfect matches. When manually annotated, these two ORFs became one HET domain-containing ORF corresponding to candidate vic7 allele vic7-2. The percentages of amino acid identity for the corresponding EP155 and EP146 ORFs surrounding the putative vic7 locus are indicated at the bottom.