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. Author manuscript; available in PMC: 2013 Feb 15.
Published in final edited form as: J Neurosci Methods. 2011 Nov 10;204(1):189–201. doi: 10.1016/j.jneumeth.2011.10.027

Table 3. Spike sorting results of four software packages, Klusta-Kwik, wave_clus, Osort, and NeuroQuest, with five datasets, four simulated data and one real data.

( ) indicates the number of classified units and TP represents true positive. For NeuroQuest, details of spike sorting methods, selected feature and clustering method, are listed. The number of clusters was decided by the modified EM algorithm (Figueiredo and Jain, 2002).

SNR4 (11 units) SNR3 (11 units) SNR2 (11 units) Wave_clus data (3 units) real data (5 units)
Klusta Kwik (11 units) TP: 99.96% (11 units) TP: 95.32% (9 units) TP : 86.82% (1 units) TP : 42.51% (3 units) TP : 67.43%
Wave_clus (11 units) TP : 99.96% (10 units) TP : 92.50% (8 units) TP : 86.48% (3 units) TP : 98.48% (4 units) TP : 84.72%
Osort (11 units) TP : 99.84% (11 units) TP : 93.13% (9 units) TP : 85.83% (1 units) TP : 46.72% (2 units) TP : 41.75%
Neuro Quest (11 units)
Temporal
PCA
Fuzzy c-mean
TP : 99.92%
(11 units)
Temporal
PCA
Fuzzy c-mean
TP : 98.84%
(10 units)
Temporal
PCA
Fuzzy c-mean
Class merging
Sub-clustering
TP : 91.43%
(2 units)
wavelet
footprint
Fuzzy c-mean
TP : 73.24%
(5 units)
Temporal
PCA
Fuzzy c-mean
TP : 98.85%