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. 2012 Jan;139(1):31–56. doi: 10.1085/jgp.201110654

Table 4.

Values of model parameters that best simulate photocurrents in dark-adapted bass single cones: Response to 2-s steps of light

Parameter Categorya Units Cone 1 Cone 2 Cone 3
VP* Intensity Statistical VP*/s 61 1,177 25,872 171 773 35,236 50 1,975 41,466
γmax Adjustable µM/s 100b 100 90 100 100 63 100 100 55
T* Ψ0 Adjustable 1/s 250c 250c 250c 250 250 250 220 220 220
PDE* βsub Adjustable µM/s per molecule 0.439d 0.439d 0.439d 0.347 0.347 0.347 0.317 0.317 0.317
αPDEinit Adjustable 1/s 5e 6.5 2 9 10 3 5
αPDEfinal 1/s 9 97 55 8.4 42
kαPDE 1/s 9 2 11
Ca2+ influx KHA Adjustable µM 0.073 0.073 0.073 0.052 0.052 0.052 0.098 0.098 0.098
CHA Adjustable µM 21.1 21.1 21.1 28.2 28.2 28.2 30.8 30.8 30.8
B Adjustable 11.3 11.3 11.3 10 10 10 15 15 15
Ca2+ efflux JCamax Statistical pA 4.59 4.59 4.59 5 5 5 3.56 3.56 3.56
KCaexc Adjustable µM 0.025 0.025 0.025 0.025 0.025 0.025 0.025 0.025 0.025
a

Values of invariant parameters first used to compute dark and flash photocurrents are not repeated here. They have the same values listed in Table 2.

b

γmax experimental value is 100–150 s−1 (Tachibanaki et al., 2005).

c

This value was initially constrained to 150 s−1 from experimental data (Leskov et al., 2000).

d

Experimental values of PDE* kcat range from 2.2 to 8 × 103 s−1 (Dumke et al., 1994; D’Amours and Cote, 1999; Muradov et al., 2009). From the definition of βsub (Eq. 3.11) and the highest kcat value, the mean value βsub 0.334 (Table 5) indicates that the effective intracellular volume for cGMP is, on average, 0.08 pL, rather than the 0.19 pL used throughout these calculations. This factor of approximately two can probably be accounted for by the fact that the volume, in fact, changes some from cell to cell and is not the rigid assigned value of 0.19 pL. There is experimental uncertainty because the size of each and every cone recorded from was not measured. Also, the actual concentration of cGMP may be a little smaller than the computed value because there is intracellular cGMP binding (Olson and Pugh, 1993), a fact that would be revealed as a smaller apparent volume.

e

This value was initially constrained to 10 s−1 at dim lights from the analysis of dark current noise in bass single cones (Holcman and Korenbrot, 2005).