Table 2. Carbohydrate utilization genes displaying inter-species differences.
| Species | RAST Pathway | Description | ORF(s) |
| O. kitaharae | Fructooligosaccharide and Raffinose Utilization | MSM (multiple sugar metabolism) operon regulatory protein | OKIT_0495OKIT_0684 |
| Sucrose-6-phosphate hydrolase (EC 3.2.1.26) | OKIT_0688 | ||
| O. kitaharae | Maltose & Maltodextrin Utilization | Maltose O-acetyltransferase (EC 2.3.1.79) | OKIT_0692 |
| Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) | OKIT_0712 | ||
| Neopullulanase (EC 3.2.1.135) | OKIT_0711 | ||
| Pullulanase (EC 3.2.1.41) | OKIT_0709 | ||
| O. kitaharae | D-ribose utilization | Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) | OKIT_0349 |
| Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) | OKIT_0347 | ||
| Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) | OKIT_0348 | ||
| O. kitaharae | Fructose utilization | PTS system, fructose-specific IIA component (EC 2.7.1.69) | OKIT_0249 |
| PTS system, fructose-specific IIB component (EC 2.7.1.69) | OKIT_0248 | ||
| PTS system, fructose-specific IIC component (EC 2.7.1.69) | OKIT_0250 | ||
| O. oeni | COG3533 | Arabinose-proton symporter | fig|203123.5.peg.226a |
| L-arabinose isomerase (EC 5.3.1.4) | fig|203123.5.peg.224b | ||
| L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) | fig|203123.5.peg.223b | ||
| Putative glycosyl hydrolase of unknown function (DUF1680) | YP_809865.1c | ||
| Ribulokinase (EC 2.7.1.16) | YP_809879.1c | ||
| Transcriptional repressor of arabinoside utilization operon, GntR family | YP_809878.1c | ||
| Xyloside transporter XynT | YP_810752.1c; fig|203123.5.peg.206a |
a
RAST protein ID (not annotated in O. oeni PSU-1 Genbank submission).
b
RAST protein ID (pseudogene in O. oeni PSU-1, full ORF present in other strains of O. oeni).
c
O. oeni Genbank protein ID from genome accession number NC_008528.1.