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. 2012 Jan 5;7(1):e29907. doi: 10.1371/journal.pone.0029907

Table 3. Human lung tumor data sets used in the correlation and GSEA studies.

GSEA p values
Set PMID Number of tumors Cell type E11.5/E11.5* E19.5/E18*
GSE12667 18948947 75 Adenocarcinoma 0.017 0.003
GSE10245 18486272 58 All <0.001 <0.001
40 Adenocarcinoma 0.432 0.044
18 Squamous 0.034 0.062
GSE10799 19208797 16 Adenocarcinoma 0.228 0.222
GSE10445 19176396 72 Adenocarcinoma 0.024 0.005
Bild 2006 16273092 111 All <0.001 <0.001
58 Adenocarcinoma <0.001 <0.001
53 Squamous <0.001 <0.001
GSE7670 17540040 27 Adenocarcinoma 0.124 0.821
Shedden DFCI 1 18641660 52 Adenocarcinoma <0.001 0.118
Shedden DFCI 2 30 Adenocarcinoma 0.772 0.155
Shedden Moffitt 79 Adenocarcinoma 0.02 0.118
Shedden UMich 178 Adenocarcinoma 0.009 0.001
Shedden MSKCC 104 Adenocarcinoma 0.043 0.18
Lu U133A 17194181 18 Squamous 0.003 0.005
Bhattacharjee 2001 11707567 254 All 0.001 0.054
197 Adeno and Squamous only <0.001 <0.001
176 Adenocarcinoma 0.009 0.035
21 Squamous 0.063 0.002
Borczuk 2004 15087295 74 All 0.261 0.036
17 Adeno and Squamous only 0.592 0.183
10 Adenocarcinoma 0.457 0.626
7 Squamous 0.537 0.704
Lu U95Av2 17194181 36 All 0.771 0.125
32 Adeno and Squamous only 0.797 0.143
14 Adenocarcinoma 0.435 0.038
18 Squamous 0.961 0.717
Beer 2002 12118244 96 Adenocarcinoma 0.125 0.293

bold GSEA values <0.05.

*

Bound/Expressed.