Table 4. Selected GO categories over-represented within developmental genes correlated to NKX2-1 levels.

GO	Gene Symbols
E11.5 positive correlation
Cellular metabolism	AASS AGPAT3 AHCYL1 APBB1 ASXL1 BCKDK CREBBP CRY2 CSTF3 CTSD CYB561 DDB1 DNAJC8 DPM2 EDF1 EIF4G1 ELAVL1 ENTPD4 EPC1 ERBB3 ERH ERO1LB FBXW5 FGFR3 FOXA1 FTS GNA11 GTF2H4 GUSB HADHB HERC2 HUWE1 KLF9 LONP METAP1 MLH1 MLLT3 MVK MXD4 MYBBP1A NEK6 NFIB NFYC NONO
Transcription	APBB1 ASXL1 CREBBP EDF1 EPC1 FOXA1 GTF2H4 KLF9 MLLT3 MXD4 MYBBP1A NFIB NFYC NOTCH1 PHF13 POLR2C RAB25 REST SMAD7 SMARCA5 SOX4 SP3 TCEB2 UBP1 UNR ZFP90 ZNF23 ZNF297

GO level ≥4; Bayes Factor ≥0; p≤0.03; number of genes≥10.