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. Author manuscript; available in PMC: 2013 Feb 5.
Published in final edited form as: Virology. 2011 Dec 20;423(1):77–88. doi: 10.1016/j.virol.2011.11.019

Table 3.

Comparison of the protein sequence between the H4N8 isolate and other H4 subtype viruses with the molecular determinants of virus pathogenicity in mammalian speciesa.

Protein Position Virus
Pathogenicity
6KS0185 H4N8/Australia H4N8/Osaka H4N6/Shiga Low High Ref.b
PB2 271 T T T T T A a)
482 R R K K K R b)
627 E E E E E K c)
701 D D D D D N d), e)
714 S S S S S R d)
PB1 13 P P P P P d)
538 D D D D D G d)
678 S N S S N d)
PB1-F2 66 N N N N N S f)
PA 97 T T T C T I g)
550 L L L L I L h)
615 R R K K K N d)
M1 139 T T T T T A b)
NS1 92 D D (ND)c D D E i)
C-terminus GSEV ESEV (ND) ESEV RSEV ESEV j), k)
a

The protein sequences of 6KS0185, A/red-necked stint/Australia/1/04 (H4N8), A/duck/Osaka/1/05 (H4N8), and A/duck/Shiga/8/04 (H4N6) were compared with the molecular determinants of viral pathogenicity. The amino acids matched to the determinants for high pathogenicity are highlighted by gray shading.

c

Not determined.