Table 5.

Proteins differentially expressed by change in growth rates

Protein and category	Name or function	Log2 growth rate (h−1) ratio
		0.05/0.15	0.4/0.15
Amino acid biosynthesis
EF2550	Serine hydroxymethyltransferase	−1.04	−0.79
Biosynthesis of cofactors, prosthetic group, carriers
EF1860	3-Methyl-2-oxobutanoate hydroxymethyltransferase	0.52	0.75
EF0901	Isopentenyl diphosphate delta isomerase, putative	0.63	1.1
Cell envelope
EF2193	dTDP-4-dehydrorhamnose 3,5-epimerase	−0.30	0.79
EF2194	Glucose-1-phosphate thymidyltransferase	−0.26	0.59
EF3183	Cell wall surface anchor family protein	1.00	0.44
Cellular processes
EF0080	Gls24 protein	−0.15	−0.5
EF1744	General stress protein	1.30	1.46
EF1991	Cold shock protein CspC	−0.25	0.42
EF3312	tRNA modification GTPase TrmE	1.01	1.63
DNA metabolism
EF0002	DNA polymerase III, beta subunit	0.65	0.32
EF0883	Primosomal DnaI	−0.60	1.15
Energy metabolism
EF0020	Phosphotransferase system, mannose-specific IIAB components	−0.15	−1.3
EF0195	Phosphoglycerate mutase 1	−0.33	0.52
EF0949	Phosphotransacetylase	0.30	0.54
EF1125	Putative l-ascorbate 6-phosphate lactonase	0.02	0.61
EF1131	l-Ribulose-5-phosphate 4-epimerase	0.39	0.75
EF1167	Fructose-bisphosphate aldolase	0.77	0.24
EF1353	Pyruvate dehydrogenase complex E1 component, alpha subunit	0.30	0.94
EF1354	Pyruvate dehydrogenase complex E1 component, beta subunit	−0.12	0.65
EF1356	Dihydrolipoamide dehydrogenase	−0.53	−1.64
EF1416	Glucose-6-phosphatase isomerase	−0.02	−0.89
EF1526	Glyceraldehyde-3-phosphate dehydrogenase	0.08	−0.95
EF1612	Pyruvate formate-lyase activating enzyme	0.24	−1.18
EF1962	Triosephosphate isomerase	0.04	0.73
EF1963	Phosphoglycetare kinase	−0.37	−0.2
EF1964	Glyceraldehyde-3-phosphate dehydrogenase	0.35	−1.07
EF0283	3-Oxoacyl-(acyl carrier protein) synthetase II	−0.12	−0.91
Fatty acid and phospholipid metabolism
EF2875	Acetyl-CoA carboxylase subunit alpha	0.00	0.89
EF2881	3-Ketoacyl-(acyl carrier protein) reductase	−0.36	1.10
EF2882	Acyl carrier protein S-malonyltransferase	0.00	0.54
Hypothetical proteins
EF1227	Hypothetical protein	−0.99	0.26
EF1241	Hypothetical protein	−0.14	0.11
EF1560	Hypothetical protein	0.47	0.91
Protein fate
EF2200	Methionine aminopeptidase	−0.48	0.70
F2898	Peptidyl-prolyl cis trans isomerase	0.75	0.74
EF3066	Peptide deformylase	0.81	1.48
Protein synthesis
EF0212	30S ribosomal protein S3	0.97	1.39
EF0221	50S ribosomal protein L6	0.60	0.72
EF0701	Peptide chain release factor 3	0.36	1.22
Purines, pyrimidines, nucleosides, and nucleotides
EF0228	Adenylate kinase	0.61	1.59
EF1713	Orotidine 5′-phosphate decarboxylase	0.57	0.91
EF1721	Bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase	−1.16	0.61
EF2549	Uracil phosphoribosyltransferase	0.04	0.60
EF3293	Inositol-5-monophosphate dehydrogenase	0.08	−0.79
Regulatory functions, signal transduction, transcription, and transport and binding proteinsa
EF1741	Catabolite control protein A	0.25	0.38
EF3289	DNA-binding response regulator	0.82	1.31
EF1050	DNA-binding response regulator	0.38	1.04
EF0233	DNA direct RNA polymerase subunit alpha	0.50	−0.26
EF0865	Glycine betaine/carnitine/choline transporter, ATP-binding protein	−0.24	−0.54
Unknown function
EF0076	Oxidoreductase short chain dehydrogenase/reductase family	0.31	−1.64
EF0877	Aldo-/keto-reductase family oxidoreductase	−0.64	0.48
EF1138	Aldo-/keto-reductase family oxidoreductase	−0.45	0.23
EF2591	Glyoxalase family protein	0.54	1.07
EF2656	Flavoprotein family protein	0.97	1.16
EF2927	Haloacid dehydrogenase superfamily hydrolase	0.92	2.04

^aEF1741 and EF3289 have regulatory functions; EF1050 is involved in signal transduction; EF0233 is involved in signal transcription; and EF0865 is involved in transport and binding.