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. 2012 Jan;32(1):107–117. doi: 10.1128/MCB.06138-11

Fig 5.

Fig 5

Nonfunctional VDJ- and DJ-rearranged IgH mRNAs are efficiently degraded by NMD. mRNA levels from nonproductively rearranged IgHfrVκ or IgHwt alleles in LPS-stimulated B cells treated or not with CHX on day 4 were determined. (A) Northern blotting was performed by using the frVκ probe that is specific for Vκ6 segments and allows the simultaneous identification of IgHfrVκ and Igκ (normalization) mRNAs. The stimulation of B cells with LPS in the absence of additional cytokines induces preferential class switch recombination (CSR) to γ2b and γ3 isotypes. (B) Nonproductive mRNAs from switched IgHfrVκ alleles were assessed by semiquantitative PCR using primers frVκ-for and Cγ3-rev (primer set k/h in Fig. 1A). (C) IgMa-positive B cells were sorted from 129/B6 F1 (IgHa/b) mice (as described in the legend to Fig. 3D) and stimulated with LPS for 4 days. Nonproductive VDJ-rearranged mRNAs from switched IgHb alleles were then analyzed by using a consensus VH7183 forward primer (VH7183-for) and allotype-specific Cγ2b reverse primers (primer set a/i in Fig. 1A). (D) Degradation of DJ-Cμ mRNAs by NMD was assayed with wt mice by semiquantitative RT-PCR using a consensus forward primer (DHL-for) located at the 5′ end of most DH segments (primer set d/g in Fig. 1A). Representative results from 3 to 4 different mice (A, B, and D) or from 2 independent cell sorting experiments (C) are shown.