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. 2012 Jan 11;7(1):e25387. doi: 10.1371/journal.pone.0025387

Table 4. Top regions associated at P<10−5.

Top SNP Alleles (A1/A2) Chr Pos #SNPs at P<10−4 Freq (A1) OR (A1) P Nearest gene, description, relative SNP location
rs11856574* G/A 15 27518736 1/13 0.86 2.02 5.0×10−6 KIAA0574, hypothetical protein, intron
rs482329* C/G 1 232883177 3/18 0.61 1.60 5.5×10−6 IRF2BP2, interferon regulatory factor 2 binding protein 2, 72 kb downstream
rs3848198* C/T 15 78426619 2/4 0.38 1.81 9.8×10−6 ARNT2, Aryl hydrocarbon receptor nuclear translocator 2; hypoxia associated transcription factor, 57 kb upstream
rs6565373* T/C 16 86817543 0/1 0.59 0.32 9.8×10−6 BANP, BTG3 associated nuclear protein isoform a; negative regulator of p53 transcription, 149 kb downstream

*imputed; #SNPs at P<10−4 indicates the number of SNPs at P<10−4 within +/−150 kb of the top SNP that were either directly genotyped or imputed (genotyped/imputed).