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. 2012 Jan 11;7(1):e29939. doi: 10.1371/journal.pone.0029939

Figure 4. Mutations at the E2F/NF-e/c-Myb binding site affect binding of protein complexes to the vav1 promoter in vitro.

Figure 4

(A) Electrophoretic mobility shift assay (EMSA) with Jurkat nuclear extracts was performed in the presence of digoxigenin-labeled probe spanning nucleotides −45 to 0 of vav1 promoter and containing E2F/NF-e/c-Myb and TCFα/PU.1/ELF1 binding sites (lil157-158; Table 3). The competition assay was performed with the labeled oligonucleotide and unlabeled competitor oligonucleotides with point mutations as indicated in Table 3 in molar ratio of 1∶1 and 1∶5. The arrow shows the position of the complex that demonstrates sensitivity to the introduced mutations. (B) EMSA performed with labeled oligonucleotide containing only E2F/NF-e/c-Myb binding site (lil 87-88; Table 3).