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. 2012 Jan 11;7(1):e29939. doi: 10.1371/journal.pone.0029939

Figure 7. Methylation on CpG dinucleotides at putative transcription factor binding sites changes the affinity of protein complexes for the vav1 regulatory region.

Figure 7

(A) EMSA was performed with Jurkat T cell nuclear extracts and lil3-4 labeled oligonucleotide. The probe was created by annealing complementary oligonucleotides lil79 and lil80 (Table 3).-3′). The following unlabeled competitors were added: unmethylated lil79-80 oligonucleotide (C3C4); oligo methylated on both CpG methylation sites (metC3 metC4); oligo methylated only on CpG3 (metC3C4), or only on CpG4 (C3 metC4). Competitor oligonucleotide was added in an amount equal to the labeled oligo (1∶1) or in 5 molar excess (1∶5).