Table 1.
B. valaisiana, B. bissettii, and B. spielmanii sequence accession numbers
| Replicon namea | Accession no. for strain (GPID)b |
||
|---|---|---|---|
| B. valaisiana VS116 (19843) | B. bissettii DN127 (29363) | B. spielmanii A14S (28635) | |
| Chromosome | ABCY02000001c | CP002746 | ABKB02000001 to -13c |
| lp17 | CP001439 | CP002756 | CP001468 |
| lp25 | CP001437 | CP002757 | |
| lp28-2 | |||
| lp28-3 | CP001440 | CP002758 | CP001471 |
| lp28-4 | CP002759 | CP001470 | |
| lp28-7 | CP002760 | ||
| lp28-8 | CP001442 | CP001465 | |
| lp36 | CP001436 | CP001466 | |
| lp38 | CP001464 | ||
| lp54 | CP001433 | CP002761 | CP001469 |
| lp56 | CP002762 | ||
| cp9 | CP001438e | CP002755 | ABKB02000016,cABKB02000020c,e |
| cp26 | CP001432 | CP002747 | CP001467 |
| cp32-3 | CP002749 | ABKB02000026c | |
| cp32-4 | CP002750 | ||
| cp32-5 | CP001441 | CP002751 | ABKB02000031c |
| cp32-6 | CP002752 | ||
| cp32-7 | CP001434 | CP002753 | |
| cp32-quad (cp32-9)f | CP002754 | ||
| cp32-10 | CP001435 | ||
| cp32-11 | CP002748 | ||
| cp32-12 | Fused to cp32-quad | ABKB02000021c | |
| cp32-13 | Fused to cp32-quad | ||
| Unidentified plasmid contigs | ABKB02000014, -15, -17 to -19, -22 to -25, -27 to -30, -32 to -41c,d | ||
a
Plasmids are named according to their PFam32 partition/replication protein (see Casjens et al. [3]).
b
Genome project ID number.
c
Draft sequence; contigs not joined.
d
All but ABKC02000036 are cp32-like.
e
Unlike other cp9 plasmids in B. burgdorferi, VS116 cp9 (and probably a very similar sequence in A14S) carries a parA-type gene in the partition gene cluster.
f
The DN127 plasmid that carries cp32-9, cp32-12, and cp32-13 type partition genes (i.e., is a fusion between these three plasmids and a fourth whose partition genes are deleted) was named cp32-quad.