Table 3.
The 25 most highly induced and repressed genes in the transcriptome of fliL pseudoswarmer cellsa
| Locus tag | Gene | Product | Fold change |
|---|---|---|---|
| PMI2722 | NA | Microcompartment protein | 15.31 |
| PMI2718 | NA | Hypothetical protein | 14.6 |
| PMI2720 | NA | Microcompartment protein | 9.68 |
| PMI2719 | NA | Aldehyde-alcohol dehydrogenase | 7.57 |
| PMI2721 | NA | Microcompartment protein | 7.22 |
| PMI0536 | uca | Major fimbrial subunit | 6.93 |
| PMI1722 | NA | Phage protein | 5.42 |
| PMI0534 | NA | Fimbrial usher protein | 4.7 |
| PMI0535 | NA | Fimbrial chaperone | 3.97 |
| PMI3091 | NA | Fimbrial subunit | 3.72 |
| PMI1721 | NA | Phage protein | 3.7 |
| PMI1250 | NA | Transcriptional regulator | 3.65 |
| PMI1720 | NA | Phage protein | 3.43 |
| PMI2987 | NA | Hypothetical protein | 3.22 |
| PMI1180 | NA | Methyl-accepting chemotaxis protein | 3.21 |
| PMI2399 | tetAJ | Tetracycline resistance protein | 3.02 |
| PMI1647 | flgI | Flagellar basal body P-ring protein | 2.97 |
| PMI1650 | flgF | Flagellar basal-body rod protein | 2.9 |
| PMI1710 | NA | Phage protein | 2.8 |
| PMI1025 | sitC | Iron ABC transporter, membrane protein | 2.69 |
| PMI1719 | NA | Phage protein | 2.63 |
| PMI2916 | NA | Acetyltransferase | 2.58 |
| PMI0068 | NA | Hypothetical protein | 2.5 |
| PMI2716 | NA | Propanediol utilization protein | 2.45 |
| PMI1712 | NA | Phage protein | 2.35 |
| PMI3003 | NA | Fimbrial operon regulator | 0.16 |
| PMI1468 | NA | Fimbrial subunit | 0.16 |
| PMI2908 | NA | β-Ketoacyl-ACP synthase | 0.15 |
| PMI0578 | NA | MFS-family transporter | 0.15 |
| PMI2030 | NA | Toxin transporter | 0.15 |
| PMI1637 | fliM | Flagellar motor switch protein FliM | 0.15 |
| PMI1644 | flgL | Flagellar hook-associated protein 3 | 0.14 |
| PMI1662 | cheY | Chemotaxis response regulator | 0.13 |
| PMI1661 | cheZ | Chemotaxis regulator CheZ | 0.1 |
| PMI1663 | cheB | Chemotaxis response regulator protein | 0.09 |
| PMI1622 | fliS | Flagellar protein FliS | 0.09 |
| PMI2813 | aer | Aerotaxis receptor | 0.08 |
| PMI0182 | NA | Transcriptional regulator | 0.07 |
| PMI1667 | cheW | Purine-binding chemotaxis protein | 0.07 |
| PMI1657 | flgN | Flagellar synthesis protein | 0.06 |
| PMI1656 | flgM | Anti-σ28 factor FlgM | 0.06 |
| PMI1664 | cheR | Chemotaxis methyltransferase CheR | 0.05 |
| PMI1645 | flgK | Flagellar hook-associated protein 1 | 0.05 |
| PMI1668 | cheA | Chemotaxis protein CheA | 0.04 |
| PMI1665 | NA | Methyl-accepting chemotaxis protein | 0.03 |
| PMI1669 | motB | Chemotaxis protein (motility protein B) | 0.02 |
| PMI1666 | NA | Methyl-accepting chemotaxis protein | 0.02 |
| PMI1670 | motA | Flagellar motor protein MotA | 0.02 |
| PMI1621 | fliD | Flagellar capping protein | 0.01 |
| PMI1620 | flaA | Flagellin 1 | 0.01 |
a
NA, not applicable; ACP, acyl carrier protein; MFS, major facilitator superfamily.