Table 2.
Primer name | Primer sequence (5′–3′)a |
---|---|
Cj1386-sense | CGGTACCCGGGGATCCAAGGCGTAGCACA |
AAGATATGC | |
Cj1386-antisense | CGACTCTAGAGGATCCAAAAAGAAGAAATTGCTGAAAAGC |
Cj1386-SE-inverse | GAACTAAAGGGCGCATTCTTATGAAAGCGCTAAAATGC |
Cj1386-AS-inverse | GAACACCGCCGAGCAGCAAGCATAAGCAAGCTATCG |
katA + Cj1386-SE | CGGTACCCGGGGATCCCGATTTTGGAAACATTATAGCTGA |
katA + Cj1386-AS | CGACTCTAGAGGATCCTAAAAGGGGCGGTTCCTATC |
katA + Cj1386-SE-inv | GAACTAAAGGGCGCAGGCGATAGCTTGCTTATGCT |
katA + Cj1386-AS-inv | GAACACCGCCGAGCACGGATGAAGAATGTCGGAGT |
Cj1386-SE-comp | GATTTAGATGTCTAGCGCTTCTATGGAAGGAGTTGA |
Cj1386-AS-comp | GGGGAAGCTTTCTAGAAAAAGAAGAAATTGCTGAAAAGC |
katA + Cj1386-SE-comp | GATTTAGATGTCTAGTTACGTGCATCCCAGTGTTC |
katA + Cj1386-AS-comp | GGGGAAGCTTTCTAGTAAAAGGGGCGGTTCCTATC |
Cat-SE | TGCTCGGCGGTGTTCCTTTCCAAG |
Cat-AS | TGCGCCCTTTAGTTCCTAAAGGGT |
AR56-AS | CATCCTCTTCGTCTTGGTAGC |
ak233-SE | GCAAGAGTTTTGCTTATGTTAGCAG |
ak234-SE | GAAATGGGCAGAGTGTATTCTCCG |
ak235-SE | GTGCGGATAATGTTGTTTCTG |
katA-RT-SE | AAGTGGAGCTTATGGCGAAA |
katA-RT-AS | ACTTCGCTTTTTGCACGATT |
katA-RTint-SE | AGCTGCCGAGCTTATAGCAA |
Cj1386-RT-SE | GAGCTTTGCAAAATGGCTTT |
Cj1386-RT-AS | CCACATCTTTGCGTCCAAAC |
Cj1386-RTint-AS | TAATGGGGTTTGTCCACGAT |
Cj1384c-RT-SE | TGGGATGCACGTAATGAAAA |
Cj1387c-RT-AS | TTGATTTTCCAACAAGAGCCTTA |
katA-SE-qPCR | GCGATGTGAGAGGTTTTGCT |
katA-AS-qPCR | CAAAAATCCCAAGCAGCATT |
Cj1386-SE-qPCR | GGCGATAGCTTGCTTATGCT |
Cj1386-AS-qPCR | TAATGGGGTTTGTCCACGAT |
metC_SE | CTAAACTTATTCATTGTGGCAGAGG |
metC_AS | CTCTGTATTTTTCCAAGTTGCGTG |
KatA_NcoI | GCCATGGCTATGAAAAAATTGACTAACGA |
KatA_NotI | GCGGCCGCTTAGTTTGCCACCAAAAGTGG |
Restriction sites are shown in bold.