Table 2.
Alignment Method | CoMFA Model | CoMSIA Model | ||||
---|---|---|---|---|---|---|
GD a | PH b | CS c | GD | PH | CS | |
No. | 1 | 2 | 3 | 4 | 5 | 6 |
q2 | 0.283 | 0.628 | 0.578 | 0.574 | 0.532 | 0.588 |
r2 | 0.42 | 0.941 | 0.867 | 0.97 | 0.859 | 0.834 |
SEE d | 0.818 | 0.268 | 0.404 | 0.198 | 0.411 | 0.447 |
Fe | 36.929 | 192.635 | 78.313 | 207.094 | 99.622 | 81.965 |
ONC f | 1 | 4 | 4 | 7 | 3 | 3 |
Field analysis | ||||||
Steric | 0.663 | 0.619 | 0.698 | 0.177 | 0.224 | 0.263 |
Electrostatic | 0.337 | 0.381 | 0.618 | 0.52 | 0.407 | 0.459 |
Hydrophobic | - | - | - | - | - | - |
H-bond donor | - | - | - | 0.303 | 0.369 | 0.277 |
H-bond acceptor | - | - | - | - | - | - |
Test set | ||||||
r2predg | 0.405 | 0.785 | 0.752 | 0.605 | 0.695 | 0.749 |
Glide docking;
Pharmacophore;
Common substructure;
Standard estimated error;
Fisher value;
Optimal number of components;
Predictive correlation coefficient for test set.