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. Author manuscript; available in PMC: 2012 Nov 1.
Published in final edited form as: Metab Eng. 2011 Sep 1;13(6):666–673. doi: 10.1016/j.ymben.2011.08.003

Table 1.

Stoichiometric equations and standard reaction entropies of the remaining elementary modes in AS411. All remaining biomass-producing modes have cell growth and ethanol production coupled. The 42 elementary modes can be grouped into 4 families of modes that have the same overall reaction stoichiometry.

Family Reaction stoichiometry No. of EMs YETOH1 YBIO1 ΔS2
Xylose substrate
1 Xylose → 1.67 Ethanol + 1.67 CO2+ 1.67 ATP 3 0.51 0 0.363
2 Xylose → 1.67 Ethanol + 1.67 CO2 15 0.51 0 0.327
3 Xylose + 0.59 NH3 → 2.40 Biomass + 0.09 H2 +0.92 Ethanol + 0.98 CO2 18 0.28 0.41 0.302
4 Xylose + 0.59 NH3 → 2.40 Biomass + 0.09 Formate + 0.92 Ethanol + 0.89 CO2 6 0.28 0.41 0.285

Glucose substrate
1 Glucose → 2 Ethanol + 2 CO2+ 2 ATP 3 0.51 0 0.547
2 Glucose → 2 Ethanol + 2 CO2 15 0.51 0 0.503
3 Glucose + 0.70 NH3 → 2.88 Biomass + 0.11 H2+ 1.10 Ethanol + 1.18 CO2 18 0.28 0.41 0.473
4 Glucose + 0.70 NH3 → 2.88 Biomass + 0.11 Formate + 1.10 Ethanol + 1.07 CO2 6 0.28 0.41 0.453
1

Yield is shown in g-product produced per g-sugar consumed.

2

The standard entropy of reaction per mole glucose of each family (kJ/K-mole) is calculated using Gibbs equation and correlations with the degree of reduction given in Sandler and Orbey (1991).