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. Author manuscript; available in PMC: 2012 Dec 8.
Published in final edited form as: J Med Chem. 2011 Nov 4;54(23):8214–8223. doi: 10.1021/jm201215n

Table 2. Biological and physical properties of analogs active against T. cruzi amastigotes.

Compound T. cruzi
IC-50 (μM)
SI Bzn/Compa clogP pKa Lipinski Rule of 5 PSA (Å2)
1 0.14 147 9.6 3.20 9.20 S 101.45
2 0.15 66 8.9 4.16 8.84 S 110.68
8 1.97 45 0.7 4.56 5.06 S 101.45
16 0.61 236 2.2 2.43 7.31 S 101.45
17 0.14 976 9.6 2.95 7.31 S 101.45
18 0.31 373 4.4 3.22 7.53 S 101.45
20 1.48 66 0.9 4.05 5.06 S 114.34
21 1.74 44 0.8 4.52 5.06 S 114.34
23 1.03 129 1.3 0.99 6.81 S 114.34
24 0.46 208 2.9 1.51 6.81 S 114.34
29 0.17 816 8.0 3.51 9.44 S 88.56
34 0.31 460 4.3 2.60 8.76 S 101.45
35 0.36 200 3.8 5.55 6.87 V (2) 105.55
36 0.32 144 4.2 5.88 6.87 V (2) 105.55
37 0.32 383 4.2 2.63 9.65 S 88.56
38 0.15 634 9.3 5.62 8.79 V (2) 79.77
40 0.34 >562 4.0 2.86 8.33 S 83.01
41 0.41 287 3.3 3.38 8.52 S 83.01
42 0.04 1320 33.8 3.03 7.85 S 83.01
Bnz 1.35* 1.0 1.32 S 92.74
a

Bzn/Comp: IC50 of Bnz / IC50 of Comp. PSA: Polar surface area.

*

Median values from 43 measurements in parallel with each compound. All physical properties were predicted by using the Marvin Calculator (www.chemaxon.com).