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. 2011 Sep 14;40(2):487–498. doi: 10.1093/nar/gkr629

Table 2.

Prediction performances for coaxial stacking and junction family type

Coaxial stacking prediction 3-way junctions (%) 4-way junctions (%)
No assumption on junction family 81 77
Junction family assumed known 83 87
Junction family prediction 3-way junctions (%) 4-way junctions (%)
No assumption on coaxial stacking 85 74
Coaxial stacking assumed known 86 81
Coaxial stacking prediction 5 to 10-way junction (%)
60
Two-step coaxial stacking prediction 3-way junctions (%) 4-way junctions (%)
(junction family, stacking) 82 80
Two-step junction family prediction 3-way junctions (%) 4-way junctions (%)
(coaxial stacking, junction family) 86 71

Prediction performance is shown for each experiment by determining junction family type for 3 and 4-way junctions and coaxial helical stacking for all junctions. Prediction values improve when knowledge of the junction family type or coaxial stacking is provided.