TABLE 2.
Mutation in RdRp | RdRp activitya | Mutation effect | Con1/luc activityb | Mutation effect | Phenotypec |
---|---|---|---|---|---|
%WT | %WT | ||||
T92S | 18 | Down | 4 | Down | I |
P93A | 90 | WT-like | 67 | WT-like | I |
P94A | 115 | WT-like | 0 | Null | II |
H95S | 104 | WT-like | 0 | Null | II |
S96T | 82 | WT-like | 0 | Null | II |
A97S | 88 | WT-like | 0 | Null | II |
R98K | 157 | Up | 0 | Null | II |
R98I | 68 | WT-like | 0 | Null | II |
S99T | 0 | Null | 0 | Null | I |
K100I | 20 | Down | 0 | Null | II |
F101Y | 134 | Up | 0 | Null | II |
F101A | 89 | WT-like | 0 | Null | II |
G102A | 32 | Down | 3 | Down | I |
Y103F | 89 | WT-like | 98 | WT-like | I |
G104A | 146 | Up | 125 | WT-like | NA |
A105S | 62 | WT-like | 60 | WT-like | I |
WT | 100 | WT | 100 | WT | I |
D318N | 0 | Null | 0 | Null | I |
The results of standard primer-dependent RdRp assays obtained with purified mutated enzymes are shown.
The results of transient replication assay obtained with mutated Con1/luc replicons (144 h post-transfection).
For phenotype I, the mutation results in the same effect in both assays (up/up, WT-like/WT-like, down/down, or null/null mutations). For phenotype II, the mutation is non-null in primer-dependent RdRp assay and null in transient replication assay; NA indicates not applicable.