Repair of 1-meA and 3-meC by hABH1(Δ3).
A, DNA
oligonucleotides containing 1-me(dA) or 3-me(dC) were incubated with hABH3 or
hABH1(Δ3) (20 pmol) for 15 min, followed by decomposition to nucleosides
and LC/MS/MS quantization. The values are means of triplicates. B,
methyl-poly(rA) or methylpoly(rC) were incubated with AlkB or hABH1(Δ3)
and treated as in A. The values are means of duplicates. C,
repair of carboxyfluorescein end-labeled single-stranded or double-stranded
49-mer DNA oligonucleotides containing 3-me(dC) or a 1-me(dA). The substrates
were incubated with hABH1(Δ3) (0-20 pmol) or AlkB (10 pmol) and
subsequently cleaved with DpnII restriction enzyme, run on PAGE, and analyzed
for fluorescence.